Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835025.1_cds_XP_016505800.1_19097
CDS Infomation

[gene=LOC107823626] [db_xref=GeneID:107823626] [protein=pectinesterase/pectinesterase inhibitor PPE8B-like] [protein_id=XP_016505800.1] [location=complement(join(5397..6094,7430..8029,9244..9559))] [gbkey=CDS]
Sequence

ATGGGTACTTCTTTGCCTTCATTTTGTGGAGTGCTTCTTCTACTTTTATGTATAGGTTAT
CCTAATTTGGTGAGATGTAGGGCGGAGGATTTAAGTTTTCTTCAATCAGAGTGTTTAAAG
GTGCCAGCTTCGGAGTTTGTGGGCTCTGTTAAGTCTACCATTGACACTGTCCGTCAAGTC
ACTTCTATTGTGTCGAAATTCGTCAGCTTCTTTGGTGATTTTCGACTTTCGAATGCCATT
TCTGATTGCCTTGATCTGTTGGACCTCTCTGCAGATGAACTTACTTGGACTCTCACTGCT
TCTCAGAATCCCAAAGGGAAAAACAACAGCACAGGCAATTTAAGTGCAGATTTGAGGAAT
TATTTGAGCGGAGCACTTATTAATCAAGACACATGCATAGATGGATTTGATGGAACAAAC
GGAATTGTCAAGAATTTGGTTGCGGGAAGCCTTAACCAAGTCACTACATTAGTCCGTGAC
ATTCTTTACATGGTCCGCCCCGTCCCTAAAAACGCCCCCAGGGCTAATGACGGACGTGGA
AAACCATGGCAATGGTCCCGAGAGAGGAGGCTAACGTCAAACAAAGGAGACGACAACTCA
TTCCCTTCCTGGCTTAACCGAAAAGATAGACGGTTGTTGCAGTCAGCTCCCACTACAGGT
GTTGTTGCGGACGTTGTAGTAGCTCTAGATGGAACGGGTAATTTTACTCGTATTAAAGAT
GCTATATCAGCAGCACCAGAATTGAGTACCAAGAGATTTGTGATACATATCAAGAAAGGT
ATTTATAACGAGTATGTGGAAATCAGCAAGAAGAAATGGAACATATTGATGATCGGTGAC
GGAATAGATGTTACTGTTATTTCTGGGAATAGAAGTTTTATTGATGGATGGACCACTTAC
AGATCTGCAACATTTGCTGTGAAAGGTCAAGGATTCATTGCACGGGACATGACATTTGAG
AACACAGCAGGACCCCAAAAGCACCAAGCCGTTGCATTTCGCTCTGACTCAGACTTGTCT
GTGTTGTTCAGATGCGCGTTGAGGGGCTACCAGGACACTCTCTACGCCCATTCTATGCGC
CAATTCTACCGAAACTGCGTAATTACTGGCACGGTAGACTTCATATTCGGAGATGGCACG
GTCGTGTTCCAAAATTGTCAAATATTAGCCCGAAAGGGACTACCTGAACAAAAGAACACC
ATCACAGCCCAAGGCCGAAAAGAAGCTGCTGAAACGACAGGCTTCTCCATCCAATTCTCT
AATATATCTGGCGAACCAGATCTATTAGCTTCACTTAACTCTACACAAACATTCCTTGGT
AGGCCGTGGAAGGCATATTCGCGCACTGTAATCATGCAATCATACATGAGTAATGTAATT
AAACCACAGGGCTGGTTAGAGTGGAACGGTAATATATCACTTGACACATTGTACTACGCC
GAGTATCAAAATTACGGGCCCGGTGCGGGCTTAGGCGCTAGAGTCAATTGGCCTGGTTAT
CATCTACTCAATGATTCATCGCAGGCAAATAATTTCACAGTGGCTCAGTTCATTTTGGGT
AACTCATGGTTGCCTTCTACTGGAGTTAAGTACACTGCTGGTCTAGCGGTTTAA

Peptide Sequence

PEP ID

XP_016505800.1
PEP Infomation

PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B-like [Nicotiana tabacum]
Sequence

MGTSLPSFCGVLLLLLCIGYPNLVRCRAEDLSFLQSECLKVPASEFVGSVKSTIDTVRQV
TSIVSKFVSFFGDFRLSNAISDCLDLLDLSADELTWTLTASQNPKGKNNSTGNLSADLRN
YLSGALINQDTCIDGFDGTNGIVKNLVAGSLNQVTTLVRDILYMVRPVPKNAPRANDGRG
KPWQWSRERRLTSNKGDDNSFPSWLNRKDRRLLQSAPTTGVVADVVVALDGTGNFTRIKD
AISAAPELSTKRFVIHIKKGIYNEYVEISKKKWNILMIGDGIDVTVISGNRSFIDGWTTY
RSATFAVKGQGFIARDMTFENTAGPQKHQAVAFRSDSDLSVLFRCALRGYQDTLYAHSMR
QFYRNCVITGTVDFIFGDGTVVFQNCQILARKGLPEQKNTITAQGRKEAAETTGFSIQFS
NISGEPDLLASLNSTQTFLGRPWKAYSRTVIMQSYMSNVIKPQGWLEWNGNISLDTLYYA
EYQNYGPGAGLGARVNWPGYHLLNDSSQANNFTVAQFILGNSWLPSTGVKYTAGLAV

Transcript Sequence

Gene sequence data has not been registered.